Publications

@article{nokey,

title = {Improved data normalization methods for reverse phase protein microarray analysis of complex biological samples},

author = {Chiechi A and Mueller C and Boehm KM and Romano A and Benassi MS and Picci P and Liotta LA and Espina V},

doi = {10.2144/000113926},

year  = {2012},

date = {2012-09-01},

journal = {Biotechniques},

volume = {0},

issue = {0},

pages = {1-7},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {-Omics and cancer biomarkers: link to the biological truth or bear the consequences},

author = {Liotta LA and Petricoin EF 3rd},

doi = {10.1158/1055-9965.EPI-12-0635},

year  = {2012},

date = {2012-07-18},

journal = {Cancer Epidemiol Biomarkers Prev},

volume = {21},

issue = {8},

pages = {1229-35},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {MS analysis reveals O-methylation of L-lactate dehydrogenase from pancreatic ductal adenocarcinoma cells},

author = {Zhou W and Capello M and Fredolini C and Racanicchi L and Piemonti L and Liotta LA and Novelli F and Petricoin EF},

doi = {10.1002/elps.201200017},

year  = {2012},

date = {2012-07-01},

journal = {Electrophoresis},

volume = {33},

issue = {12},

pages = {1850-4},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Multiplexed protein signal pathway mapping identifies patients with rectal cancer that responds to neoadjuvant treatment},

author = {Mammano E and Galdi F and Pierobon M and Tessari E and Deng J and Pucciarelli S and Agostini M and De Marchi F and Canzonieri V and De Paoli A and Belluco C and Liotta LA and Petricoin E and Pilati P and Nitti D},

doi = {10.1016/j.clcc.2012.05.003},

year  = {2012},

date = {2012-06-02},

journal = {Clin Colorectal Cancer},

volume = {11},

issue = {4},

pages = {268-74},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {The spectra count label-free quantitation in cancer proteomics},

author = {Zhou W and Liotta LA and Petricoin EF},

year  = {2012},

date = {2012-05-30},

journal = {Cancer Genomics Proteomics},

volume = {9},

issue = {3},

pages = {135-45},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Interlaboratory Reproducibility of Selective Reaction Monitoring Assays Using Multiple Upfront Analyte Enrichment Strategies},

author = {Prakash A and Rezai T and Krastins B and Sarracino D and Athanas M and Russo P and Zhang H and Tian Y and Li Y and Kulasingam V and Drabovich A and Smith CR and Batruch I and Oran PE and Fredolini C and Luchini A and Liotta L and Petricoin E and Diamandis EP and Chan DW and Nelson R and Lopez MF},

doi = {10.1021/pr300014s},

year  = {2012},

date = {2012-05-29},

journal = {J. Proteome Res},

volume = {11},

issue = {8},

pages = {3986–3995},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Assessing candidate serum biomarkers for Alzheimer's disease: a longitudinal study},

author = {Zabel M and Schrag M and Mueller C and Zhou W and Crofton A and Petersen F and Dickson A and Kirsch WM},

doi = {10.3233/JAD-2012-112012},

year  = {2012},

date = {2012-05-21},

journal = {J Alzheimers Dis},

volume = {30},

issue = {2},

pages = {311-321},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Proteomic analysis of eccrine sweat: implications for the discovery of schizophrenia biomarker proteins},

author = {Raiszadeh MM and Ross MM and Russo PS and Schaepper MA and Zhou W and Deng J and Ng D and Dickson A and Dickson C and Strom M and Osorio C and Soeprono T and Wulfkuhle JD and Petricoin EF and Liotta LA and Kirsch WM},

doi = {10.1021/pr2007957},

year  = {2012},

date = {2012-04-06},

journal = {J Proteome Res},

volume = {11},

issue = {4},

pages = {2127-39},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {The significance of PTEN and AKT aberrations in pediatric T-cell acute lymphoblastic leukemia},

author = {Zuurbier L and Petricoin EF 3rd and Vuerhard MJ and Calvert V and Kooi C and Buijs-Gladdines JG and Smits WK and Sonneveld E and Veerman AJ and Kamps WA and Horstmann M and Pieters R and Meijerink JP},

doi = {10.3324/haematol.2011.059030},

year  = {2012},

date = {2012-04-04},

journal = {Haematologica},

volume = {97},

issue = {9},

pages = {1405-13},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Pilot and feasibility study: prospective proteomic profiling of mammary epithelial cells from high-risk women provides evidence of activation of pro-survival pathways},

author = {Ibarra-Drendall C and Troch MM and Barry WT and Broadwater G and Petricoin EF 3rd and Wulfkuhle J and Liotta LA and Lem S and Baker JC Jr and Ford AC and Wilke LG and Zalles C and Kuderer NM and Hoffman AW and Shivraj M and Mehta P and Williams J and Tolbert N and Lee LW and Pilie PG and Yu D and Seewaldt VL},

doi = {10.1007/s10549-011-1609-9},

year  = {2012},

date = {2012-04-01},

journal = {Breast Cancer Res Treat},

volume = {132},

issue = {2},

pages = {487-98},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Altered serum iron and copper homeostasis predicts cognitive decline in mild cognitive impairment},

author = {Mueller C and Schrag M and Crofton A and Stolte J and Muckenthaler MU and Magaki S and Kirsch W},

doi = {10.3233/JAD-2011-111841},

year  = {2012},

date = {2012-03-20},

journal = {J Alzheimers Dis},

volume = {29},

issue = {2},

pages = {341-350},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Functional protein pathway activation mapping of the progression of normal skin to squamous cell carcinoma},

author = {Einspahr JG and Calvert V and Alberts DS and Curiel-Lewandrowski C and Warneke J and Krouse R and Stratton SP and Liotta L and Longo C and Pellacani G and Prasad A and Sagerman P and Bermudez Y and Deng J and Bowden GT and Petricoin EF 3rd},

doi = {10.1158/1940-6207.CAPR-11-0427},

year  = {2012},

date = {2012-03-01},

urldate = {2012-03-01},

journal = {Cancer Prev Res (Phila)},

volume = {5},

issue = {3},

pages = {403-13},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = { Inventions and patents: a practical tutorial},

author = {Tidwell JL and Liotta LA},

doi = {10.1007/978-1-60327-216-2_26},

year  = {2012},

date = {2012-01-01},

journal = {Methods in Molecular Biology},

volume = {823},

pages = {391-408},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Serum low-molecular-weight protein fractionation for biomarker discovery},

author = {VanMeter AJ and Camerini S and Polci ML and Tessitore A and Trivedi N and Heiby M and Kamal Y and Hansen J and Zhou W},

doi = {10.1007/978-1-60327-216-2_15},

year  = {2012},

date = {2012-01-01},

journal = {Methods Mol Biol},

volume = {823},

pages = {237-49},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Reduction of preanalytical variability in specimen procurement for molecular profiling},

author = {Espina V and Mueller C},

doi = {10.1007/978-1-60327-216-2_4},

year  = {2012},

date = {2012-01-01},

journal = {Methods Mol Biol},

volume = {823},

pages = {49-57},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Reverse-Phase Protein Microarrays},

author = {Pierobon M and VanMeter AJ and Moroni N and Galdi F and Petricoin E 3rd},

doi = {https://doi.org/10.1007/978-1-60327-216-2_14},

year  = {2012},

date = {2012-01-01},

journal = {Methods Mol Biol},

volume = {823},

pages = {215-235},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {A novel biomarker harvesting nanotechnology identifies Bak as a candidate melanoma biomarker in serum},

author = {Longo C and Gambara G and Espina V and Luchini A and Bishop B and Patanarut AS and Petricoin EF 3rd and Beretti F and Ferrari B and Garaci E and De Pol A and Pellacani G and Liotta LA},

doi = {10.1111/j.1600-0625.2010.01187.x},

year  = {2011},

date = {2011-12-16},

journal = {Exp Dermatol},

volume = {20},

issue = {1},

pages = {29-34},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Multifunctional core-shell nanoparticles: discovery of previously invisible biomarkers},

author = {Tamburro D and Fredolini C and Espina V and Douglas TA and Ranganathan A and Ilag L and Zhou W and Russo P and Espina BH and Muto G and Petricoin EF 3rd and Liotta LA and Luchini A},

doi = {10.1021/ja207515j},

year  = {2011},

date = {2011-11-30},

journal = {J Am Chem Soc},

volume = {133},

issue = {47},

pages = {19178-88},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Chemoresistant colorectal cancer cells and cancer stem cells mediate growth and survival of bystander cells},

author = {Bose D and Zimmerman LJ and Pierobon M and Petricoin E 3rd and Tozzi F and Parikh A and Fan F and Dallas N and Xia L and Gaur P and Samuel S and Liebler DC and Ellis LM},

doi = {10.1038/bjc.2011.449},

year  = {2011},

date = {2011-11-22},

journal = {Br J Cancer},

volume = {105},

issue = {11},

pages = {1759-67},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Proteomic analysis reveals Warburg effect and anomalous metabolism of glutamine in pancreatic cancer cells},

author = {Zhou W and Capello M and Fredolini C and Racanicchi L and Piemonti L and Liotta LA and Novelli and Petricoin EF 3rd},

doi = {10.1021/pr2009274},

year  = {2011},

date = {2011-11-17},

journal = {J Proteome Res},

volume = {11},

issue = {2},

pages = {554-63},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Methadone adverse reaction presenting with large increase in plasma methadone binding: a case series},

author = {Lu WJ and Zhou W and Kreutz Y and Flockhart DA},

doi = {10.1186/1752-1947-5-513},

year  = {2011},

date = {2011-10-10},

journal = {J Med Case Reports},

volume = {5},

number = {513},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Cancer biomarkers: closer to delivering on their promise},

author = {Liotta LA and Petricoin E},

doi = {10.1016/j.ccr.2011.08.021},

year  = {2011},

date = {2011-09-13},

journal = {Cancer Cell},

volume = {20},

issue = {3},

pages = {279-80},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {One-step preservation of phosphoproteins and tissue morphology at room temperature for diagnostic and research specimens},

author = {Mueller C and Edmiston KH and Carpenter C and Gaffney E and Ryan C and Ward R and White S and Memeo L and Colarossi C and Petricoin EF 3rd and Liotta LA and Espina V},

doi = {10.1371/journal.pone.0023780},

year  = {2011},

date = {2011-08-11},

journal = {PLoS One},

volume = {6},

number = {e23780},

issue = {8},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Development of a novel proteomic approach for mitochondrial proteomics from cardiac tissue from patients with atrial fibrillation},

author = {Goudarzi M and Ross MM and Zhou W and Van Meter A and Deng J and Martin LM and Martin C and Liotta L and Petricoin E and Ad N},

doi = {10.1021/pr200108m},

year  = {2011},

date = {2011-08-05},

journal = {J Proteome Res},

volume = {10},

issue = {8},

pages = {3484-92},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Asymmetric cancer cell division regulated by AKT},

author = {Dey-Guha I and Wolfer A and Yeh AC and G Albeck J and Darp R and Leon E and Wulfkuhle J and Petricoin EF 3rd and Wittner BS and Ramaswamy S},

doi = {10.1073/pnas.1109632108},

year  = {2011},

date = {2011-08-02},

journal = {Proc Natl Acad Sci U S A},

volume = {108},

issue = {31},

pages = {12845-50},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Truncated ErbB2 expressed in tumor cell nuclei contributes to acquired therapeutic resistance to ErbB2 kinase inhibitors},

author = {Xia W and Liu Z and Zong R and Liu L and Zhao S and Bacus SS and Mao Y and He J and Wulfkuhle JD and Petricoin EF 3rd and Osada T and Yang XY and Hartman ZC and Clay TM and Blackwell KL and Lyerly HK and Spector NL},

doi = {10.1158/1535-7163.MCT-10-0991},

year  = {2011},

date = {2011-08-01},

journal = {Mol Cancer Ther},

volume = {10},

issue = {8},

pages = {1367-74},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Protein pathway activation mapping of brain metastasis from lung and breast cancers reveals organ type specific drug target activation},

author = {Improta G and Zupa A and Fillmore H and Deng J and Aieta M and Musto P and Liotta LA and Broaddus W and Petricoin EF 3rd and Wulfkuhle JD},

doi = {10.1021/pr200065t},

year  = {2011},

date = {2011-07-01},

journal = {J Proteome Res},

volume = {10},

issue = {7},

pages = {3089-97},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Compensatory pathways induced by MEK inhibition are effective drug targets for combination therapy against castration-resistant prostate cancer},

author = {Gioeli D and Wunderlich W and Sebolt-Leopold J and Bekiranov S and Wulfkuhle JD and Petricoin EF 3rd and Conaway M and Weber MJ},

doi = {10.1158/1535-7163.MCT-10-1033},

year  = {2011},

date = {2011-06-28},

journal = {Mol Cancer Ther},

volume = {10},

issue = {9},

pages = {1581-90},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Francisella tularensis 2-C-Methyl-D-Erythritol 4-Phosphate Cytidylyltransferase: Kinetic Characterization and Phosphoregulation},

author = {Tsang A and Seidle H and Jawaid S and Zhou W and Smith C and Couch R},

doi = {10.1371/journal.pone.0020884},

year  = {2011},

date = {2011-06-09},

journal = {PLoS One},

volume = {6},

number = {e20884},

issue = {6},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Pilot and feasibility study: prospective proteomic profiling of mammary epithelial cells from high-risk women provides evidence of activation of pro-survival pathways},

author = {Ibarra-Drendall C and Troch MM and Barry WT and Broadwater G and Petricoin EF 3rd and Wulfkuhle J and Liotta LA and Lem S and Baker JC Jr and Ford AC and Wilke LG and Zalles C and Kuderer NM and Hoffman AW and Shivraj M and Mehta P and Williams J and Tolbert N and Lee LW and Pilie PG and Yu D and Seewaldt VL},

doi = {10.1007/s10549-011-1609-9},

year  = {2011},

date = {2011-06-07},

journal = {Breast Cancer Res Treat},

volume = {132},

issue = {2},

pages = {487-98},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Iron, zinc and copper in the Alzheimer's disease brain: a quantitative meta-analysis},

author = {Schrag M and Mueller C and Oyoyo U and Smith MA and Kirsch WM},

doi = {10.1016/j.pneurobio.2011.05.001},

year  = {2011},

date = {2011-05-11},

journal = {Prog Neurobiol},

volume = {94},

issue = {3},

pages = {296-306},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {High resolution mapping of the cardiac transmural proteome using reverse phase protein microarrays},

author = {Anderson T and Wulfkuhle J and Petricoin E 3rd and Winslow RL},

doi = {10.1074/mcp.M111.008037},

year  = {2011},

date = {2011-04-13},

journal = {Mol Cell Proteomics},

volume = {10},

number = {M111.008037},

issue = {7},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Homologous control of protein signaling networks},

author = {Napoletani D and Signore M and Sauer T and Liotta LA and Petricoin E 3rd},

doi = {10.1016/j.jtbi.2011.03.020},

issn = {0022-5193},

year  = {2011},

date = {2011-03-23},

journal = {Journal of Theoretical Biology},

volume = {279},

issue = {1},

pages = {29-43},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Protein Microarray Analysis of Mammary Epithelial Cells from Obese and Nonobese Women at High Risk for Breast Cancer: Feasibility Data},

author = {Pilie PG and Ibarra-Drendall C and Troch MM and Broadwater G and Barry WT and Petricoin EF and Wulfkuhle JD and Liotta LA and Lem S and Baker JC and Stouder A and Ford AC and Wilke LG and Zalles CM and Mehta P and Williams J and Shivraj M and Su Z and Geradts J and Yu D and Seewaldt VL},

doi = {10.1158/1055-9965.EPI-10-0847},

year  = {2011},

date = {2011-03-07},

journal = {Cancer Epidemiol Biomarkers Prev},

volume = {20},

issue = {3},

pages = {476–482},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Proteomic characterization and functional analysis of outer membrane vesicles of Francisella novicida suggests possible role in virulence and use as a vaccine},

author = {Pierson T and Matrakas D and Taylor YU and Manyam G and Morozov VN and Zhou W and van Hoek ML},

doi = {10.1021/pr1009756},

year  = {2011},

date = {2011-03-04},

journal = {J Proteome Res},

volume = {10},

issue = {3},

pages = {954-67},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Discovery of mouse spleen signaling responses to anthrax using label-free quantitative phosphoproteomics via mass spectrometry},

author = {Manes NP and Dong L and Zhou W and Du X and Reghu N and Kool AC and Choi D and Bailey CL and Petricoin EF 3rd and Liotta LA and Popov SG},

doi = {10.1074/mcp.M110.000927},

year  = {2011},

date = {2011-03-01},

journal = {Mol Cell Proteomics},

volume = {10},

number = {M110.000927},

issue = {3},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Mechanism of cell adaptation: when and how do cancer cells develop chemoresistance?},

author = {Fodale V and Pierobon M and Liotta L and Petricoin E},

doi = {10.1097/PPO.0b013e318212dd3d},

year  = {2011},

date = {2011-03-01},

journal = {Cancer J},

volume = {17},

issue = {2},

pages = {89-95},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Proteomic Analysis of Pancreatic Ductal Adenocarcinoma Cells Reveals Metabolic Alterations},

author = {Zhou W and Capello M and Fredolini C and Piemonti L and Liotta LA and Novelli F and Petricoin E 3rd},

doi = {10.1021/pr101179t},

year  = {2011},

date = {2011-02-10},

journal = {J. Proteome Res},

volume = {10},

issue = {4},

pages = {1944–1952},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = { The use of hydrogel microparticles to sequester and concentrate bacterial antigens in a urine test for Lyme disease},

author = {Douglas TA and Tamburro D and Fredolini C and Espina BH and Lepene BS and Ilag L and Espina V and Petricoin EF 3rd and Liotta LA and Luchini A},

doi = {10.1016/j.biomaterials.2010.10.004},

year  = {2011},

date = {2011-02-01},

journal = {Biomaterials},

volume = {32},

issue = {4},

pages = {1157-66},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Phosphoproteomic analysis of signaling pathways in head and neck squamous cell carcinoma patient samples},

author = {Frederick MJ and VanMeter AJ and Gadhikar MA and Henderson YC and Yao H and Pickering CC and Williams MD and El-Naggar AK and Sandulache V and Tarco E and Myers JN and Clayman GL and Liotta LA and Petricoin EF 3rd and Calvert VS and Fodale V and Wang J and Weber RS},

doi = {10.1016/j.ajpath.2010.10.044},

year  = {2011},

date = {2011-02-01},

journal = {Am J Pathol},

volume = {178},

issue = {2},

pages = {548-71},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {Reverse-phase protein microarrays (RPPA) as a diagnostic and therapeutic guide in multidrug resistant leukemia},

author = {Maraldi T and Bertacchini J and Benincasa M and Guida M and De Pol A and Liotta LA and Petricoin EF 3rd and Cocco L and Marmiroli S},

doi = {10.3892/ijo.2010.850},

year  = {2011},

date = {2011-02-01},

journal = {Int J Oncol},

volume = {38},

issue = {2},

pages = {427-35},

keywords = {},

pubstate = {published},

tppubtype = {article}

}

@article{nokey,

title = {The -Omics in Drug Development},

author = {Moridani MY and Araujo RP and Johnson CH and Lindon JC},

year  = {2011},

date = {2011-01-01},

journal = {Pharmacokinetics in Drug Development},

pages = {145-173},

keywords = {},

pubstate = {published},

tppubtype = {article}

}